Package: omics 0.1-5
omics: '--omics' Data Analysis Toolbox
A collection of functions to analyse '--omics' datasets such as DNA methylation and gene expression profiles.
Authors:
omics_0.1-5.tar.gz
omics_0.1-5.zip(r-4.5)omics_0.1-5.zip(r-4.4)omics_0.1-5.zip(r-4.3)
omics_0.1-5.tgz(r-4.4-any)omics_0.1-5.tgz(r-4.3-any)
omics_0.1-5.tar.gz(r-4.5-noble)omics_0.1-5.tar.gz(r-4.4-noble)
omics_0.1-5.tgz(r-4.4-emscripten)omics_0.1-5.tgz(r-4.3-emscripten)
omics.pdf |omics.html✨
omics/json (API)
NEWS
| # Install 'omics' in R: |
| install.packages('omics', repos = c('https://gcampanella.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 8 years agofrom:b919e13e7b. Checks:OK: 5 NOTE: 2. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 15 2024 |
| R-4.5-win | NOTE | Nov 15 2024 |
| R-4.5-linux | NOTE | Nov 15 2024 |
| R-4.4-win | OK | Nov 15 2024 |
| R-4.4-mac | OK | Nov 15 2024 |
| R-4.3-win | OK | Nov 15 2024 |
| R-4.3-mac | OK | Nov 15 2024 |
Exports:mintersectmlmmlmermunionna.countpqqpqq.ciranef.ranksranks.heatmapre.matchvar.components
Dependencies:bootclicolorspacefarvergluegtablelabelinglatticelifecyclelme4MASSMatrixminqamunsellnlmenloptrpheatmapR6RColorBrewerRcppRcppEigenrlangscalesviridisLite
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Cross Phenotype Meta-Analysis | cpma |
| Multiple Linear Models | mlm |
| Multiple Linear Mixed-Effects Models | mlmer |
| Count Missing Values | na.count |
| Quantile-Quantile Plot for p-values | pqq pqq.ci |
| Extract Random Effect Rank Distributions | ranef.ranks ranef.ranks.merMod |
| Plot Random Effect Rank Distributions | ranks.heatmap |
| Pattern Matching and Extraction | re.match |
| Set Operations on Multiple Vectors | mintersect munion |
| Extract Variance Components | var.components var.components.merMod |
